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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909532.1_cds_XP_016459703.1_53205
CDS Infomation

[gene=LOC107783249] [db_xref=GeneID:107783249] [protein=glycogen phosphorylase 1-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016459703.1] [location=join(61847..62521,62748..62862,63031..63131,63758..63849,64295..64430,64590..64658,64755..64856,65264..65362,65879..65989,66513..>66719,<69100..69156,69500..69646,69736..69795,69885..69989,70780..70941,71534..71607,71918..72041,72188..72279,73467..73587,73668..73820)] [gbkey=CDS]
Sequence

ATGGCTGCCATTTCAGTTCCTCTCCTCACCCTTCGATCACCTCAAACCAACCGCCCATTC
CCTTCATTCTTTAATCTCAACCGTCCCTTTTCAACTTCACTCTCCTCCAATTGCAGCTTC
AACCATTTAACAGTCTCAAATAGTAGTACTTTTTCTAACCAAGCCATCACCGAAACAACA
ACCTCTGATTACTCTACCATCAATGTCCAAAACGACGACGCTTTGGACACCACTCTTTTC
GTTATTCGGGCCAAGAACCGAATTGGCCTTCTCCAAATCATCACCCGCGTATTCAAAGTC
CTCGGGCTCACAATTCAAAAGGCCATTGTTGAATTCGAAGGTGAGTTTTTCGTGAAGAAG
TTTTTCGTCAGTGATTCTAACGGTAAGAAGATTGAGAAAACGGAACATTTGGAGAAGATT
CAGAAGGCTTTAATGGAAGCCATTGATACTGGCAGAGTATCGCCGTCGGTGGCGGTGGTT
AGTGGGAGAGGAGTGGTTGTGAGGAAAGCTGGGTTGAACTTAGGAGAGAGGAAAGCAAAA
GCAGAGAAGATGTTTGGGTTAATGGATGGGTTCTTGAAGAATGATGCAGTTAGTTTGCAA
AAAGATATTCTTGATCATGTTGAATTTACTGTTGCTCGATCAAGATTCAATTTTGATGAT
TTTGAAGCTTACCAGGCATTGGCGCATAGTGTCAGGGATCGGCTTATTGAACGATGGCAT
GATACTCACCAGTATTTTAAGAAGAAAGACCCCAAGCGACTGTACTTCCTTTCGCTTGAG
TTTCTTATGGGTCGTTCTCTAACTAACAGTGTCATAAACCTTGGCATCCAGGACCAATAT
GCCGATGCTTTAAGTCAGCTTGGGTTTGACTATGAAGTCTTGGCAGAGCAGGAAGGAGAT
GCTGCCCTTGGTAATGGTGGCCTAGCTCGCCTTGCAGCTTGCCAAATGGATTCCCTAGCG
ACATTGGACTACCCAGCTTGGGGTTATGGACTACGCTATCAATATGGATTATTTCGTCAG
ATCATAGTGGATGGTTTTCAACATGAACAACCTGATTTTTGGTTGAACTTTGGGAACCCC
TGGGAGATTGAACGTGTTCATGTGTCTTATCCAGTCAAGTTCTATGGGACTGTTGAAGAG
GAAGTTTTAAATGGAAAGACATGTAGAGTTTGGATACCTGCAGAATCAGTTGAAGCAGTG
GCTTATGATAATCCAATACCTGGTTATGGAACGCGAAATGCCATCAACCTACGACTTTGG
GCTGCTAAACCAAGTGATCAATATGATATGGAGTCTTACACCACTGGAGACTATATTAAT
GCTATTGTTAACAGACAGAAGGCTGAAACCATAAGTAATGTGCTGTATCCTGATGACCGT
TCTTACCAGGGTAAGGAACTGCGGTTGAAGCAACAGTATTTCTTTGTTTCAGCATCACTA
CAAGACATAATAAGGAGGTTTAAGGATTTACATAATAACTTTGATGAGTTTCCAGAGAAG
GTTGCTCTTCAGATAAATGATACACATCCGTCAATTGCCATTGCTGAGGTAATGAGAGTG
CTTGTTGATGAAGAACACTTGGATTGGAGCAAAGCATGGGGTATTGCTTGCAAGATTTTC
TCAGTCACCATTCACGCGGTACAACCTGAAGCACTTGAGAAAGTTCCCATAGATCTCCTG
GGTAGTGTTCTTCCTCGGCATTTAGAGGACTTTTATGAGCTGTGGCCTCAGAAATTTCAG
TTCAAGACTAATGGAGTAACTCAGCGCCGTTGGATAGTGGTGAGCAATCCTAGCTTGTGT
TCAATTATTTCAAAATGGCTTGGGACAGAAGCATGGATCCGTAATGTGGACCTCATAGCA
GGTTTACGAGAATATGCAGAAGATCCAGATCTACATGCCGAATGGAAGAATATGAAGAAG
GTTAACAAAATGAGGCTGGCTGAGTACATTGAAACACTTACAAGCGTGAAGGTCAGCTTG
GATGCAATGTTTGACGTGCAGATAAAACGAATACATGAATACAAAAGACAACTGCTCAAC
ATATTAGGCATCATCCACAGATATGATTGCATTAAGAATATGGATGAAAGTGACAAGCGG
AGAGTTGTACCTCGTGTATGTATAATTGGTGGGAAAGCTGCCCCTGGCTATGAAGTTGCA
AAGAAGATCATCAAACTTTGTCATGTGGTGGCTGATAAAGTTAACATTGATCCTGATGTT
GGGGATCTCCTGAAAGTGGTTTTCATCCCTGATTATAATGTCTCTGTTGCCGAACTAGTA
ATTCCGGGAACTGATCTTTCACAGCACCTAAGTACTGCTGGACATGAAGCATCTGGAACT
GGATGTATGAAATTTTTGATGAACGGTTCTTTATTGTTAGCTACTGCAGATGGCTCAGCT
GTTGAAATTGCTGAAGAAATAGGGGCAGCAAACATGTTTCTTTTTGGTGCAAAGGTAGAC
GAGGTCCCAGCGTTGCGAGAAAAAGGAACCAGCCTCAAAGGTTCACTTCAATTTGCACGA
GTTGTAAGGATGGTCCGGGATGGTCACTTTGGCTTCAAAGACTACTTCAAGTCGCTATGT
GACACTGTAGAGGAGGGTAAAGACTTTTATCTCCTGGGATCTGATTTTGCTAGTTATTTA
GAGGCTCAGGCGGCCGCTGATAGAGCATTTGTTGATCAAGAAAAGTGGACCCAAATGAGC
ATACTTTCTACTGCCGGTTCAGGGAAATTCAGCAGCGATAGAACAATAGAAGAATATGCA
GAACAGAGTTGGGGCATCGAACCCTGCAAATGCCCCTTTTGA

Peptide Sequence

PEP ID

XP_016459703.1
PEP Infomation

PREDICTED: glycogen phosphorylase 1-like [Nicotiana tabacum]
Sequence

MAAISVPLLTLRSPQTNRPFPSFFNLNRPFSTSLSSNCSFNHLTVSNSSTFSNQAITETT
TSDYSTINVQNDDALDTTLFVIRAKNRIGLLQIITRVFKVLGLTIQKAIVEFEGEFFVKK
FFVSDSNGKKIEKTEHLEKIQKALMEAIDTGRVSPSVAVVSGRGVVVRKAGLNLGERKAK
AEKMFGLMDGFLKNDAVSLQKDILDHVEFTVARSRFNFDDFEAYQALAHSVRDRLIERWH
DTHQYFKKKDPKRLYFLSLEFLMGRSLTNSVINLGIQDQYADALSQLGFDYEVLAEQEGD
AALGNGGLARLAACQMDSLATLDYPAWGYGLRYQYGLFRQIIVDGFQHEQPDFWLNFGNP
WEIERVHVSYPVKFYGTVEEEVLNGKTCRVWIPAESVEAVAYDNPIPGYGTRNAINLRLW
AAKPSDQYDMESYTTGDYINAIVNRQKAETISNVLYPDDRSYQGKELRLKQQYFFVSASL
QDIIRRFKDLHNNFDEFPEKVALQINDTHPSIAIAEVMRVLVDEEHLDWSKAWGIACKIF
SVTIHAVQPEALEKVPIDLLGSVLPRHLEIIYEINYCLMEELKKILGQDYDKLSRMSIIE
EGAVKCIRMANLSLACCHTVNGVSRLHLETLKTRVFKDFYELWPQKFQFKTNGVTQRRWI
VVSNPSLCSIISKWLGTEAWIRNVDLIAGLREYAEDPDLHAEWKNMKKVNKMRLAEYIET
LTSVKVSLDAMFDVQIKRIHEYKRQLLNILGIIHRYDCIKNMDESDKRRVVPRVCIIGGK
AAPGYEVAKKIIKLCHVVADKVNIDPDVGDLLKVVFIPDYNVSVAELVIPGTDLSQHLST
AGHEASGTGCMKFLMNGSLLLATADGSAVEIAEEIGAANMFLFGAKVDEVPALREKGTSL
KGSLQFARVVRMVRDGHFGFKDYFKSLCDTVEEGKDFYLLGSDFASYLEAQAAADRAFVD
QEKWTQMSILSTAGSGKFSSDRTIEEYAEQSWGIEPCKCPF

Transcript Sequence

Gene sequence data has not been registered.